1. 2019
  2. Published

    Sex-specific changes in the aphid DNA methylation landscape

    Mathers, T. C., Mugford, S. T., Percival-Alwyn, L., Chen, Y., Kaithakottil, G., Swarbreck, D., Hogenhout, S. A. & van Oosterhout, C., Sep 2019, In : Molecular Ecology. 28, 18, p. 4228-4241

    Research output: Contribution to journalArticle

  3. Published

    Long-term cleaning patterns of the sharknose goby (Elacatinus evelynae)

    Dunkley, K., Ellison, A. R., Mohammed, R. S., van Oosterhout, C., Whittey, K. E., Perkins, S. E. & Cable, J., Apr 2019, In : Coral Reefs. 38, 2, p. 321–330

    Research output: Contribution to journalArticle

  4. Published

    Evolutionary genomics of anthroponosis in Cryptosporidium

    Nader, J., Mathers, T. C., Ward, B. J., Pachebat, J., Swain, M., Robinson, G., Chalmers, R. M., Hunter, P., Van Oosterhout, C. & Tyler, K., 4 Mar 2019, In : Nature Microbiology. 4, p. 826–836

    Research output: Contribution to journalArticle

  5. Published

    Albugo candida race diversity, ploidy and host‐associated microbes revealed using DNA sequence capture on diseased plants in the field

    Jouet, A., Saunders, D. G. O., McMullan, M., Ward, B., Furzer, O., Jupe, F., Cevik, V., Hein, I., Thilliez, G. J. A., Holub, E., van Oosterhout, C. & Jones, J. D. G., Feb 2019, In : New Phytologist. 221, 3, p. 1529-1543

    Research output: Contribution to journalArticle

  6. Published

    Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes

    Thilliez, G. J. A., Armstrong, M. R., Lim, T-Y., Baker, K., Jouet, A., Ward, B., Van Oosterhout, C., Jones, J. D. G., Huitema, E., Birch, P. R. J. & Hein, I., Feb 2019, In : New Phytologist. 221, 3, p. 1634-1648

    Research output: Contribution to journalArticle

  7. 2018
  8. Published

    Contrasting effects of acute and chronic stress on the transcriptome, epigenome, and immune response of Atlantic salmon

    Uren Webster, T. M., Rodriguez-Barreto, D., Martin, S. A. M., Van Oosterhout, C., Orozco-terWengel, P., Cable, J., Hamilton, A., Garcia De Leaniz, C. & Consuegra, S., Dec 2018, In : Epigenetics. 13, 12, p. 1191-1207 17 p.

    Research output: Contribution to journalArticle

  9. Published

    Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

    Thybert, D., Roller, M., Navarro, F. C. P., Fiddes, I., Streeter, I., Feig, C., Martin-Galvez, D., Kolmogorov, M., Janoušek, V., Akanni, W., Aken, B., Aldridge, S., Chakrapani, V., Chow, W., Clarke, L., Cummins, C., Doran, A., Dunn, M., Goodstadt, L., Howe, K. & 26 othersHowell, M., Josselin, A-A., Karn, R. C., Laukaitis, C. M., Jingtao, L., Martin, F., Muffato, M., Nachtweide, S., Quail, M. A., Sisu, C., Stanke, M., Stefflova, K., Van Oosterhout, C., Veyrunes, F., Ward, B., Yang, F., Yazdanifar, G., Zadissa, A., Adams, D. J., Brazma, A., Gerstein, M., Paten, B., Pham, S., Keane, T. M., Odom, D. T. & Flicek, P., Apr 2018, In : Genome Research. 28, 4, p. 448-459

    Research output: Contribution to journalArticle

  10. Published

    Immunogenetic novelty confers a selective advantage in host–pathogen coevolution

    Phillips, K. P., Cable, J., Mohammed, R. S., Herdegen-Radwan, M., Raubic, J., Przesmycka, K. J., Van Oosterhout, C. & Radwan, J., Feb 2018, In : Proceedings of the National Academy of Sciences of the United States of America (PNAS). 115, 7, p. 1552-1557

    Research output: Contribution to journalArticle

  11. 2017
  12. Published

    Evolutionary genetics of immunological supertypes reveals two faces of the Red Queen

    Lighten, J., Papadopulos, A. S. T., Mohammed, R. S., Ward, B. J., Paterson, I., Baillie, L., Bradbury, I. R., Hendry, A. P., Bentzen, P. & Van Oosterhout, C., 3 Nov 2017, In : Nature Communications. 8, 1294.

    Research output: Contribution to journalArticle

  13. Published

    Building a locally diploid genome and transcriptome of the diatom Fragilariopsis cylindrus

    Paajanen, P., Strauss, J., van Oosterhout, C., McMullan, M., Clark, M. D. & Mock, T., 10 Oct 2017, In : Scientific Data. 4, 170149.

    Research output: Contribution to journalArticle

  14. Published

    Immigrant reproductive dysfunction facilitates ecological speciation

    Svensson, O., Gräns, J., Celander, M. C., Havenhand, J., Leder, E. H., Lindström, K., Schöld, S., van Oosterhout, C. & Kvarnemo, C., Oct 2017, In : Evolution. 71, 10, p. 2510–2521 12 p.

    Research output: Contribution to journalArticle

  15. Published

    The effects of historical fragmentation on major histocompatibility complex class II β and microsatellite variation in the Aegean island reptile, Podarcis erhardii

    Santonastaso, T., Lighten, J., van Oosterhout, C., Jones, K. L., Foufopoulos, J. & Anthony, N. M., Jul 2017, In : Ecology and Evolution. 7, 13, p. 4568–4581

    Research output: Contribution to journalArticle

  16. Published
  17. Published

    Toll-like receptor variation in the bottlenecked population of the endangered Seychelles warbler

    Gilroy, D. L., Van Oosterhout, C., Komdeur, J. & Richardson, D. S., Jun 2017, In : Animal Conservation. 20, 3, p. 235–250

    Research output: Contribution to journalArticle

  18. Published

    The effect of extrinsic mortality on genome size evolution in prokaryotes

    Bentkowski, P., Van Oosterhout, C., Ashby, B. & Mock, T., Apr 2017, In : The ISME Journal. 11, 4, p. 1011–1018

    Research output: Contribution to journalArticle

  19. Published

    Biocontrol of common carp in Australia poses risks to biosecurity

    Lighten, J. & van Oosterhout, C., 21 Feb 2017, In : Nature Ecology & Evolution. 1, 1 p., 0087.

    Research output: Contribution to journalComment/debate

  20. Published

    The genetics of mate preferences in hybrids between two young and sympatric Lake Victoria cichlid species

    Svensson, O., Woodhouse, K., Van Oosterhout, C., Smith, A., Turner, G. F. & Seehausen, O., 15 Feb 2017, In : Proceedings of the Royal Society of London B. 284, 1849, p. 233-243 11 p., 284.

    Research output: Contribution to journalArticle

  21. Published

    Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species

    Mathers, T. C., Chen, Y., Kaithakottil, G., Legeai, F., Mugford, S. T., Baa-Puyoulet, P., Bretaudeau, A., Clavijo, B., Colella, S., Collin, O., Dalmay, T., Derrien, T., Feng, H., Gabaldón, T., Jordan, A., Julca, I., Kettles, G. J., Kowitwanich, K., Lavenier, D., Lenzi, P. & 16 othersLopez-Gomollon, S., Loska, D., Mapleson, D., Maumus, F., Moxon, S., Price, D. R. G., Sugio, A., van Munster, M., Uzest, M., Waite, D., Jander, G., Tagu, D., Wilson, A. C. C., van Oosterhout, C., Swarbreck, D. & Hogenhout, S. A., 13 Feb 2017, In : Genome Biology. 18, 27.

    Research output: Contribution to journalArticle

  22. Published

    Evolutionary genomics of a cold-adapted diatom: Fragilariopsis cylindrus

    Mock, T., Otillar, R. P., Strauss, J., McMullan, M., Paajanen, P., Schmutz, J., Salamov, A., Sanges, R., Toseland, A., Ward, B. J., Allen, A. E., Dupont, C. L., Frickenhaus, S., Maumus, F., Veluchamy, A., Wu, T., Barry, K. W., Falciatore, A., Ferrante, M. I., Fortunato, A. E. & 24 othersGlöckner, G., Gruber, A., Hipkin, R., Janech, M. G., Kroth, P. G., Leese, F., Lindquist, E. A., Lyon, B. R., Martin, J., Mayer, C., Parker, M., Quesneville, H., Raymond, J. A., Uhlig, C., Valas, R. E., Valentin, K. U., Worden, A. Z., Armbrust, E. V., Clark, M. D., Bowler, C., Green, B. R., Moulton, V., Van Oosterhout, C. & Grigoriev, I. V., 26 Jan 2017, In : Nature. 541, p. 536–540 5 p.

    Research output: Contribution to journalArticle

  23. 2016
  24. Published

    Genetic architecture and evolution of the S locus supergene in Primula vulgaris

    Li, J., Cocker, J. M., Wright, J., Webster, M. A., McMullan, M., Dyer, S., Swarbreck, D., Caccamo, M., van Oosterhout, C. & Gilmartin, P. M., 2 Dec 2016, In : Nature Plants. 2, 16188.

    Research output: Contribution to journalArticle

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